BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034H03SP1|AL429963
(841 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1637 0.0
>3x_Contig1804
Length = 51183
Score = 1637 bits (822), Expect = 0.0
Identities = 835/842 (99%), Gaps = 1/842 (0%)
Strand = Plus / Minus
Query: 1 atcgaaaactgcgaaaracaatgcccagactaattcctgaaggagcaaatacttttgtaa 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47917 atcgaaaactgcgaaagacaatgcccagactaattcctgaaggagcaaatacttttgtaa 47858
Query: 61 gcgtgcagacggatgatgtgcgtagagcaccccacacacgaacctattgcgttccacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47857 gcgtgcagacggatgatgtgcgtagagcaccccacacacgaacctattgcgttccacact 47798
Query: 121 tgattgagcacagtgaaaggatccgcattcagagagctacgtatttgaagaggcttttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47797 tgattgagcacagtgaaaggatccgcattcagagagctacgtatttgaagaggcttttgc 47738
Query: 181 aaatwaatacaaggtacctacgattctcatgcttcattaccttgaagtatattcaagatc 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47737 aaattaatacaaggtacctacgattctcatgcttcattaccttgaagtatattcaagatc 47678
Query: 241 aataggaacattgttttcttggctaaratctactgatagacacaatgagtcgacaaggct 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 47677 aataggaacattgttttcttggctaagatctactgatagacacaatgagtcgacaaggct 47618
Query: 301 tgtttatwttctcttcaagggcgtgcaggaaattgcgcctcgacatttgttggtaccccc 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47617 tgtttattttctcttcaagggcgtgcaggaaattgcgcctcgacatttgttggtaccccc 47558
Query: 361 gttatttcttaacttgtctgttttcttctgctgacattgtttcgaaaagggctaagaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47557 gttatttcttaacttgtctgttttcttctgctgacattgtttcgaaaagggctaagaatt 47498
Query: 421 tcttcataaggcttagaactttggcagttttcctgccgcagaaagcg-gcaggaataaaa 479
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 47497 tcttcataaggcttagaactttggcagttttcctgccgcagaaagcgcgcaggaataaaa 47438
Query: 480 aaaaaraatgttggacgccgttttcattggtcccgtgatcagctgttcaatggcagcttt 539
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47437 aaaaagaatgttggacgccgttttcattggtcccgtgatcagctgttcaatggcagcttt 47378
Query: 540 ccacatctccacggcattcctcctatagcccctacccctatccatggtcctgtttcttac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47377 ccacatctccacggcattcctcctatagcccctacccctatccatggtcctgtttcttac 47318
Query: 600 tttgatgctagaactgtgcatggttcagggcttctctaactaawcacatttcatcgcata 659
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 47317 tttgatgctagaactgtgcatggttcagggcttctctaactaatcacatttcatcgcata 47258
Query: 660 tctgcctatggggagcatatcgataatcaatccatcttgccattggcattgccttgttgt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47257 tctgcctatggggagcatatcgataatcaatccatcttgccattggcattgccttgttgt 47198
Query: 720 atcggacctaagatataaatacactcatggaagttcaacattttacgatcaatgttctgc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47197 atcggacctaagatataaatacactcatggaagttcaacattttacgatcaatgttctgc 47138
Query: 780 tttcggagggtccagaatagctgaacaaaacaaaatatccaacgaaaatcactaaacagc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47137 tttcggagggtccagaatagctgaacaaaacaaaatatccaacgaaaatcactaaacagc 47078
Query: 840 ag 841
||
Sbjct: 47077 ag 47076
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5174
Number of Sequences: 1807
Number of extensions: 5174
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 841
length of database: 10,358,551
effective HSP length: 16
effective length of query: 825
effective length of database: 10,329,639
effective search space: 8521952175
effective search space used: 8521952175
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)